Package | Description |
---|---|
htsjdk.tribble |
Modifier and Type | Class and Description |
---|---|
class |
TabixFeatureReader<T extends Feature,SOURCE> |
class |
TribbleIndexedFeatureReader<T extends Feature,SOURCE>
A reader for text feature files (i.e.
|
Modifier and Type | Method and Description |
---|---|
static <FEATURE extends Feature,SOURCE> |
AbstractFeatureReader.getFeatureReader(java.lang.String featureFile,
FeatureCodec<FEATURE,SOURCE> codec)
Calls
getFeatureReader(String, FeatureCodec, boolean) with requireIndex = true |
static <FEATURE extends Feature,SOURCE> |
AbstractFeatureReader.getFeatureReader(java.lang.String featureResource,
FeatureCodec<FEATURE,SOURCE> codec,
boolean requireIndex)
getFeatureReader(String, String, FeatureCodec, boolean) with null for indexResource |
static <FEATURE extends Feature,SOURCE> |
AbstractFeatureReader.getFeatureReader(java.lang.String featureResource,
FeatureCodec<FEATURE,SOURCE> codec,
Index index)
Return a reader with a supplied index.
|
static <FEATURE extends Feature,SOURCE> |
AbstractFeatureReader.getFeatureReader(java.lang.String featureResource,
java.lang.String indexResource,
FeatureCodec<FEATURE,SOURCE> codec,
boolean requireIndex) |