Package | Description |
---|---|
htsjdk.samtools.cram.build | |
htsjdk.samtools.cram.encoding | |
htsjdk.samtools.cram.encoding.huffman.codec |
Modifier and Type | Method and Description |
---|---|
Encoding<java.lang.Integer> |
CompressionHeaderFactory.IntegerEncodingCalculator.getBestEncoding() |
Constructor and Description |
---|
EncodingLengthCalculator(Encoding<java.lang.Integer> encoding) |
Modifier and Type | Class and Description |
---|---|
class |
BetaIntegerEncoding |
class |
ByteArrayLenEncoding |
class |
ByteArrayStopEncoding |
class |
ExternalByteArrayEncoding |
class |
ExternalByteEncoding |
class |
ExternalIntegerEncoding |
class |
ExternalLongEncoding |
class |
GammaIntegerEncoding |
class |
GolombIntegerEncoding |
class |
GolombLongEncoding |
class |
GolombRiceIntegerEncoding |
class |
NullEncoding<T> |
class |
SubexponentialIntegerEncoding |
Modifier and Type | Method and Description |
---|---|
<T> Encoding<T> |
EncodingFactory.createEncoding(DataSeriesType valueType,
EncodingID id)
Create an encoding for the data series type and encoding id.
|
Modifier and Type | Class and Description |
---|---|
class |
HuffmanByteEncoding |
class |
HuffmanIntegerEncoding |