Package | Description |
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htsjdk.variant.variantcontext |
Modifier and Type | Method and Description |
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protected GenotypeType |
Genotype.determineType()
Internal code to determine the type of the genotype from the alleles vector
|
GenotypeType |
Genotype.getType() |
static GenotypeType |
GenotypeType.valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name.
|
static GenotypeType[] |
GenotypeType.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
Modifier and Type | Method and Description |
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java.util.EnumMap<GenotypeType,java.lang.Double> |
GenotypeLikelihoods.getAsMap(boolean normalizeFromLog10) |
Modifier and Type | Method and Description |
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double |
GenotypeLikelihoods.getLog10GQ(GenotypeType genotype)
Deprecated.
|